Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Group Condition BPHYT_RS18735
supernatant control Vogels_fungal_media 0.1X -0.6
carbon source pyruvate (C) -0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5
carbon source D-Lactate (C) -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5
carbon source D-Glucose (C) -0.5
carbon source L-Rhamnose (C) -0.5
carbon source D-Galactose (C) -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.3
pH LB, pH7 +0.3
pH LB, pH4 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
carbon source Sebacic (C) +0.3
pH LB, pH6 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
motility inner cut, LB soft agar motility assay +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
pH LB, pH7 +0.4
temperature LB, 37C +0.4
pH LB, pH4 +0.4
temperature LB, 23C +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
motility outer cut, LB soft agar motility assay +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
lb LB +0.5
motility outer cut, LB soft agar motility assay +0.5
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.5
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BPHYT_RS18735