Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS18580
nitrogen source	D-Alanine (N)	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.8
phage	36hr PHYTO6 MOI 10	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7
nitrogen source	L-Phenylalanine (N)	-0.7
nophagecontrol	36hr Phyto Lib only	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	-0.6
supernatant control	Vogels_fungal_media 0.1X	-0.6
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
lb_dap plate control	LB_DAP agar plate, outgrowth in LB	-0.6
phage	24hr PHYTO1 MOI 1	-0.6
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-0.5
nitrogen source	L-Proline (N)	-0.5
carbon source	Protocatechuic Acid (C)	-0.5
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
carbon source	m-Inositol (C)	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
phage	P. phyto PHYTO2 MOI 0.1	+0.5
phage	24hr PHYTO6 MOI 10	+0.5
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	+0.6
phage	24hr PHYTO7 MOI 1	+0.7
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.8
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.9
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	+1.1
		remove BPHYT_RS18580