Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Group Condition BPHYT_RS17835
phage P. phyto PHYTO2 MOI 1 -1.6
phage 24hr PHYTO6 MOI 0.1 -1.3
phage 24hr PHYTO3 MOI 1 -1.2
motility outer cut, LB soft agar motility assay -1.1
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -1.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0
phage 24hr PHYTO11 MOI 0.1 -1.0
phage 24hr PHYTO1 MOI 10 -1.0
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.9
phage 24hr PHYTO8 MOI 1 -0.9
carbon source Malonic (C) -0.9
phage P. phyto PHYTO2 MOI 1 -0.8
phage 24hr PHYTO7 MOI 1 -0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.8
phage 36hr PHYTO4 MOI 1 -0.8
carbon source adipate (C) -0.8
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.7
carbon source Protocatechuic Acid (C) -0.7
phage 24hr PHYTO3 MOI 10 -0.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.7
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.7
phage 24hr PHYTO6 MOI 10 +0.7
phage 36hr PHYTO9 MOI 0.1 +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.6
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BPHYT_RS17835