Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS17035
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	-4.2
stress	Bacitracin 0.25 mg/ml	-3.4
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-3.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-3.1
carbon source	Phenylacetic 5 mM (C)	-2.6
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-2.4
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-2.2
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-2.2
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-2.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.1
nitrogen source	L-Citrulline (N)	-2.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-2.0
carbon source	L-Arginine (C)	-2.0
motility	outer cut, LB soft agar motility assay	-2.0
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	-1.9
motility	outer cut, LB soft agar motility assay	-1.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.8
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-1.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.6
phage	36hr PHYTO4 MOI 1	+1.7
nophagecontrol	36hr Phyto Lib Only	+1.8
phage	36hr PHYTO6 MOI 10	+1.9
phage	24hr PHYTO6 MOI 10	+2.1
phage	24hr PHYTO4 MOI 10	+2.7
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