Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition BPHYT_RS16405
carbon source D-Galactose (C) -2.6
phage 36hr PHYTO10 MOI 10 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.3
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.3
phage 24hr PHYTO MOI 0.1 +0.3
phage 24hr PHYTO6 MOI 10 +0.3
nutrient casaminos +0.3
phage P. phyto corn MOI 0.1 +0.3
phage 36hr PHYTO1 MOI 1 +0.3
phage 36hr PHYTO11 MOI 0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
phage 24hr PHYTO6 MOI 1 +0.3
nophagecontrol 36hr Phyto Lib Only +0.3
nutrient casaminos +0.3
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
phage 24hr PHYTO2 MOI 0.1 +0.4
carbon source Sebacic (C) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
phage 36hr PHYTO4 MOI 1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
phage 36hr PHYTO10 MOI 10 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.5
phage 24hr PHYTO7 MOI 1 +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
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BPHYT_RS16405