Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Group Condition BPHYT_RS13315
nitrogen source Uridine (N) -3.5
phage 36hr PHYTO7 MOI 1 -1.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6
phage 36hr PHYTO3 MOI 1 -1.5
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.4
phage 36hr PHYTO3 MOI 1 -1.4
phage 36hr PHYTO1 MOI 10 -1.4
phage 24hr PHYTO3 MOI 10 -1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3
phage 24hr PHYTO10 MOI 10 -1.1
carbon source Protocatechuic Acid (C) -1.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.1
carbon source D-Glucose (C) -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1
carbon source adipate (C) -1.1
phage 36hr PHYTO11 MOI 1 -1.0
phage P. phyto PHYTO2 MOI 1 -1.0
carbon source L-Fucose (C) -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9
nitrogen source L-Glutamic (N) -0.9
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.9
phage 24hr PHYTO4 MOI 0.1 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9
vitamin No vitamins t1 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0
phage 24hr PHYTO6 MOI 10 +1.0
vitamin No vitamins t2 +1.0
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.2
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BPHYT_RS13315