Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS12235
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	-2.3
stress	Lomefloxacin 0.001 mM	-2.2
phage	24hr PHYTO9 MOI 0.1	-1.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-1.0
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-0.9
phage	24hr PHYTO8 MOI 1	-0.9
nitrogen source	L-Lysine (N)	-0.9
lb_dap plate control	LB_DAP agar plate, outgrowth in LB	-0.8
phage	36hr PHYTO2 MOI 1	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
nophagecontrol	24hr Phyto Lib only	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
nutrient	L-Histidine	-0.6
temperature	LB, 37C	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
supernatant control	Vogels_fungal_media 0.1X	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
phage	24hr PHYTO6 MOI 1	-0.5
carbon source	D-Galacturonic Acid (C)	-0.5
nitrogen source	NAG (N)	+0.6
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.6
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.9
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