Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS11710
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	-0.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
phage	36hr PHYTO8 MOI 10	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-0.6
nophagecontrol	36hr Phyto Lib only	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
phage	36hr PHYTO1 MOI 1	-0.5
nitrogen source	L-Phenylalanine (N)	-0.5
phage	36hr PHYTO1 MOI 10	-0.5
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
phage	24hr PHYTO4 MOI 0.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
phage	36hr PHYTO4 MOI 0.1	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	+0.5
carbon source	propionate (C)	+0.5
carbon source	Dodecandioic (C)	+0.5
phage	36hr PHYTO6 MOI 1	+0.5
phage	24hr PHYTO3 MOI 10	+0.5
pH	LB, pH4	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
carbon source	Protocatechuic Acid (C)	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	+0.6
motility	outer cut, LB soft agar motility assay	+0.7
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