Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Group Condition BPHYT_RS03865
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.0
nutrient L-Histidine -0.4
carbon source Suberic (C) -0.4
carbon source m-Inositol (C) -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
vitamin No vitamins t2 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
phage 24hr PHYTO6 MOI 1 +0.5
nitrogen source L-Lysine (N) +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
carbon source Sebacic (C) +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9
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BPHYT_RS03865