Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS03720
carbon source	Phenylacetic 5 mM (C)	-0.7
carbon source	Sebacic (C)	-0.7
supernatant control	Vogels_fungal_media; pH 5.5	-0.6
phage	36hr PHYTO7 MOI 0.1	-0.6
no phage control	No phage control	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	+0.5
phage	24hr PHYTO4 MOI 0.1	+0.5
carbon source	Trisodium citrate (C)	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.6
nitrogen source	NAG (N)	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
nitrogen source	L-Glutamic (N)	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.7
phage	36hr PHYTO9 MOI 0.1	+0.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.7
phage	24hr PHYTO3 MOI 10	+0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.8
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.8
nitrogen source	Carnitine Hydrochloride (N)	+0.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.0
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.1
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.2
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