Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS02975
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-3.3
supernatant control	Vogels_fungal_media; pH 5.5	-3.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.7
motility	outer cut, LB soft agar motility assay	-2.7
pH	LB, pH4	-2.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.4
motility	inner cut, LB soft agar motility assay	-2.4
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-2.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-2.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.1
temperature	LB, 37C	-2.1
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.8
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-1.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.7
motility	inner cut, LB soft agar motility assay	-1.7
carbon source	Malonic (C)	-1.7
carbon source	D-Fructose (C)	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.6
phage	36hr PHYTO4 MOI 1	+1.8
phage	24hr PHYTO4 MOI 10	+2.9
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