Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS02930
phage	PHYTO3 MOI 0.1	-2.3
phage	24hr PHYTO3 MOI 10	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.0
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-1.8
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.7
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-1.6
phage	24hr PHYTO2 MOI 0.1	-1.6
carbon source	D-Glucose (C)	-1.5
phage	24hr PHYTO1 MOI 1	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3
phage	36hr PHYTO1 MOI 10	-1.3
phage	36hr PHYTO6 MOI 1	-1.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.1
no phage control	No phage control	-1.1
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-1.1
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-1.1
phage	36hr PHYTO3 MOI 0.1	-1.1
carbon source	2-Deoxy-D-Ribose (C)	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-1.0
phage	24hr PHYTO6 MOI 10	-1.0
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-1.0
phage	24hr PHYTO11 MOI 0.1	+1.1
phage	24hr PHYTO2 MOI 0.1	+1.1
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