Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Group Condition BPHYT_RS00790
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.0
nitrogen source Ammonium chloride (N) -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1
carbon source D-Galacturonic Acid (C) -1.1
phage 36hr PHYTO3 MOI 0.1 -1.0
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9
nutrient casaminos -0.9
carbon source Disodium Glutarate (C) +0.9
carbon source Protocatechuic Acid (C) +0.9
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.9
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.9
phage P. phyto PHYTO2 MOI 0.1 +0.9
carbon source D,L-Lactate (C) +1.0
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +1.0
carbon source Phenylacetic 5 mM (C) +1.0
carbon source Sebacic (C) +1.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.0
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +1.0
phage 24hr PHYTO6 MOI 1 +1.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.0
vitamin With vitamins t2 +1.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +1.1
carbon source Azelaic (C) +1.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.2
motility outer cut, LB soft agar motility assay +1.3
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.3
carbon source D-Glucose 20 mM (C) +1.5
carbon source Phenylacetic 5 mM (C) +1.7
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BPHYT_RS00790