Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS19545
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.8
mrs timecourse MRS Time24hr -0.7
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day2 -0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day6 -0.6
mrs timecourse MRS Time48hr -0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 -0.5
chicken coculture chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.4
mouse preculture cage3; mouse1; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.4
mouse preculture cage3; mouse2; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.4
stress timecourse MRS + carbenicillin Time7hr -0.4
stress timecourse MRS + carbenicillin Time48hr -0.4
stress timecourse MRS + carbenicillin Time9hr -0.4
stress timecourse MRS + carbenicillin Time3hr -0.4
stress timecourse MRS + kanamycin Time9hr -0.4
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.4
stress timecourse MRS + kanamycin Time24hr -0.4
mrs timecourse MRS Time9hr -0.3
stress timecourse MRS + carbenicillin Time8hr -0.3
mrs timecourse MRS Time8hr -0.3
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 -0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day4 -0.3
stress timecourse MRS + carbenicillin Time24hr -0.3
stress timecourse MRS + kanamycin Time8hr -0.3
stress timecourse MRS + carbenicillin Time5hr -0.3
stress Recovery broth with Thioridazine 0.1 mM +0.3
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day1 +0.3
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day3 +0.3
stress Recovery broth with Bicyclomycin 0.07 mM +0.3
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet +0.3
nutrient dropout CDM1 without Glycine +0.5
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BBR_RS19545