Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS19480
carbon source reconstituted MRS with L-Fucose 30 mM -1.9
carbon source reconstituted MRS with Difucosyllactose 7.9 mM -0.5
stress Recovery broth with Bicyclomycin 0.05 mM -0.4
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.4
stress Recovery broth with Bicyclomycin 0.07 mM -0.4
stress timecourse MRS + carbenicillin Time5hr -0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day1 -0.2
nutrient dropout CDM1 without Lysine +0.2
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day3 +0.2
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day5 +0.2
mouse mouse 4; day 2; diet=StandardDiet; sample=FecalPellet +0.2
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day4 +0.3
nutrient dropout CDM1 without Cytosine +0.3
nutrient dropout CDM1 without Isoleucine +0.3
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 +0.3
nutrient dropout CDM1 without Alanine +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day4 +0.3
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day4 +0.3
nutrient dropout CDM1 without Cyanocobalamin +0.3
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day2 +0.3
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day4 +0.3
nutrient dropout control CDM1 +0.3
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day4 +0.3
stress Recovery broth with 3-Acetylpyridine 0.04 mM +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 +0.4
nutrient dropout CDM1 without Glycine +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 +0.4
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BBR_RS19480