Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS18025
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 -0.6
nutrient dropout CDM1 without Isoleucine -0.4
carbon source reconstituted MRS with Amylopectin from maize 10 mg/ml -0.3
stress Recovery broth with Chenodeoxycholic 2.5 mM -0.3
nutrient dropout CDM1 without Alanine -0.3
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day4 +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day4 +0.3
mouse coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 +0.3
mouse preculture cage3; mouse2; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.3
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day4 +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day4 +0.3
stress Recovery broth with Benzethonium chloride 0.1 mM +0.3
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day4 +0.3
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day4 +0.4
stress Recovery broth with Ciprofloxacin 0.1 mM +0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day3 +0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day3 +0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day1 +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 +0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day5 +0.4
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day1 +0.4
mouse preculture cage3; mouse1; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 +0.4
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 +0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 +0.5
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 +0.5
mrs timecourse MRS Time48hr +0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day4 +0.6
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet +0.7
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BBR_RS18025