Fitness for 1 genes in Bifidobacterium breve UCC2003

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BBR_RS17310
nutrient dropout control	CDM1	-0.5
stress	Recovery broth with Benzethonium chloride 0.1 mM	-0.5
nutrient dropout	CDM1 without Asparagine	-0.5
nutrient dropout	CDM1 without Tryptophan	-0.5
mouse preculture	cage3; mouse2; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-0.4
nutrient dropout control	CDM1	-0.4
nutrient dropout	CDM1 without Valine	-0.4
nutrient dropout	CDM1 without FolicAcid	-0.4
nutrient dropout control	CDM1	-0.4
mouse preculture	cage3; mouse2; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-0.4
stress	Recovery broth with Nisin from Lactococcus lactis 0.001 mM	-0.4
nutrient dropout	CDM1 without Glutamine	-0.4
nutrient dropout control	CDM1	-0.4
mouse preculture	cage3; mouse2; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-0.4
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; mouse4; day3	+0.4
chicken	chicken 3; day 3; diet=StandardDiet; sample=FecalPellet	+0.4
mouse preculture	cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5	+0.4
chicken coculture	chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day5	+0.4
chicken	chicken 21; day 7; diet=StandardDiet; sample=Cecum	+0.4
mouse coculture	cage2; mouse2; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482	+0.4
stress	Recovery broth with Ticarcillin 4e-04 mM	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day1	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day4	+0.5
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; mouse5; day6	+0.7
chicken coculture	chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	+0.8
chicken coculture	chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	+0.9
		remove BBR_RS17310