Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS16875
stress Recovery broth with 3-Acetylpyridine 0.08 mM -1.1
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.8
chicken chicken 21; day 7; diet=StandardDiet; sample=Cecum -0.8
chicken chicken 21; day 7; diet=StandardDiet; sample=Small_intestine -0.7
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.7
stress Recovery broth with Gentamicin 0.4 mM -0.6
stress Recovery broth with Bicyclomycin 0.07 mM -0.5
stress timecourse MRS + carbenicillin Time48hr -0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 -0.4
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet -0.3
supernatant CDM1Gut with 50% spent media from Collinsella sp. 4_8_47FAA +0.3
supernatant CDM1Gut with 50% spent media from Clostridium sp. CC40_001C +0.3
supernatant CDM1Gut with 50% spent media from Fusobacterium sp. 12_1B +0.3
mrs timecourse MRS Time48hr +0.3
supernatant CDM1Gut with 50% spent media from Streptococcus sp. CC87K +0.3
mouse mouse 12; day 1; diet=HighFatHighSugar; sample=FecalPellet +0.3
mouse mouse 5; day 1; diet=StandardDiet; sample=FecalPellet +0.4
chicken chicken 5; day 7; diet=StandardDiet; sample=FecalPellet +0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day5 +0.4
supernatant CDM1Gut with 50% spent media from Acidaminococcus sp. D21 +0.4
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 +0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day3 +0.4
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 +0.4
nutrient dropout CDM1 without Methionine +0.5
stress Recovery broth with Levofloxacin 0.2 mM +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day6 +0.5
carbon source reconstituted MRS with Difucosyllactose 7.9 mM +0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5 +0.6
carbon source reconstituted MRS with p-Lacto-N-neo-hexaose 4.7 mM +0.7
carbon source reconstituted MRS with p-Lacto-N-neo-hexaose 4.7 mM +0.7
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BBR_RS16875