Fitness for 1 genes in Bifidobacterium breve UCC2003

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BBR_RS16570
chicken coculture	chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	-2.9
chicken	chicken 2; day 5; diet=StandardDiet; sample=FecalPellet	-2.8
chicken coculture	chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	-2.4
chicken	chicken 2; day 6; diet=StandardDiet; sample=FecalPellet	-1.9
chicken coculture	chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	-1.7
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2	-1.6
chicken	chicken 5; day 7; diet=StandardDiet; sample=FecalPellet	-1.5
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3	-1.5
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4	-1.5
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6	-1.3
chicken	chicken 5; day 6; diet=StandardDiet; sample=FecalPellet	-1.3
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3	-1.1
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6	-1.1
chicken	chicken 1; day 2; diet=StandardDiet; sample=FecalPellet	-1.1
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5	-1.1
mouse preculture	cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-1.1
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day1	-1.0
mouse	diet=StandardDiet; sample=FecalPellet; mouse2; day3	-1.0
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day3	-0.9
chicken	chicken 9; day 2; diet=StandardDiet; sample=FecalPellet	-0.9
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5	-0.9
mouse coculture	cage2; mouse2; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482	-0.9
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5	-0.9
stress	Recovery broth with Ciprofloxacin 0.1 mM	-0.9
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day3	-0.8
chicken	chicken 3; day 3; diet=StandardDiet; sample=FecalPellet	-0.8
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse15; day2	-0.7
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day4	-0.7
stress	Recovery broth with Levofloxacin 0.2 mM	+0.7
stress	Recovery broth with Bicyclomycin 0.07 mM	+0.7
		remove BBR_RS16570