Fitness for 1 genes in Bifidobacterium breve UCC2003

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BBR_RS15660
chicken	chicken 1; day 2; diet=StandardDiet; sample=FecalPellet	-6.1
chicken	chicken 2; day 5; diet=StandardDiet; sample=FecalPellet	-5.7
chicken coculture	chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	-5.6
chicken	chicken 5; day 6; diet=StandardDiet; sample=FecalPellet	-5.4
chicken	chicken 10; day 4; diet=StandardDiet; sample=FecalPellet	-5.1
chicken	chicken 5; day 7; diet=StandardDiet; sample=FecalPellet	-5.1
chicken coculture	chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	-4.8
chicken	chicken 21; day 7; diet=StandardDiet; sample=Small_intestine	-4.5
chicken	chicken 9; day 2; diet=StandardDiet; sample=FecalPellet	-4.5
chicken	chicken 21; day 7; diet=StandardDiet; sample=Cecum	-4.5
chicken	chicken 2; day 6; diet=StandardDiet; sample=FecalPellet	-4.4
chicken coculture	chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	-4.4
chicken	chicken 10; day 5; diet=StandardDiet; sample=FecalPellet	-4.2
chicken	chicken 3; day 3; diet=StandardDiet; sample=FecalPellet	-3.9
mouse preculture	cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-3.8
mouse	diet=StandardDiet; sample=FecalPellet; mouse2; day2	-3.7
mouse coculture	cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	-3.7
stress	Recovery broth with Nitrofurazone 0.02 mM	-3.5
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day4	-3.5
mouse	diet=StandardDiet2; sample=FecalPellet; mouse16; day3	-3.3
stress	Recovery broth with Nitrofurantoin 0.03 mM	-3.3
chicken	chicken 3; day 2; diet=StandardDiet; sample=FecalPellet	-3.3
stress	Recovery broth with Ciprofloxacin 0.1 mM	-3.3
stress	Recovery broth with Nitrofurazone 0.008 mM	-3.2
mouse preculture	cage3; mouse2; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-3.2
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6	-3.1
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2	-3.0
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day6	-2.9
mouse	diet=StandardDiet; sample=FecalPellet; mouse2; day1	-2.9
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse12; day2	-2.9
		remove BBR_RS15660