Fitness for 1 genes in Bifidobacterium breve UCC2003

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BBR_RS15185
nutrient dropout	CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos	-1.2
nutrient dropout	CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos	-0.9
stress	Recovery broth with Streptomycin 0.3 mM	-0.6
stress	Recovery broth with 3-Acetylpyridine 0.08 mM	-0.5
nutrient dropout control	CDM1	-0.5
nutrient dropout	CDM1 without Guanine	+0.5
nutrient dropout	CDM1 without Threonine	+0.5
stress	Recovery broth with Thioridazine 0.1 mM	+0.5
mouse	mouse 1; day 1; diet=StandardDiet; sample=FecalPellet	+0.5
mouse coculture	cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.5
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3	+0.5
nutrient dropout	CDM1 without Glutathione	+0.5
stress	Recovery broth with Thioridazine 0.1 mM	+0.6
nutrient dropout control	CDM1	+0.6
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse11; day1	+0.6
nutrient dropout	CDM1 without Cyanocobalamin	+0.6
nutrient dropout	CDM1 without Arginine	+0.6
nutrient dropout	CDM1 without Methionine	+0.6
mouse preculture	cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	+0.6
nutrient dropout	CDM1 without Isoleucine	+0.6
nutrient dropout	CDM1 without Riboflavin	+0.6
mouse	diet=StandardDiet2; sample=FecalPellet; mouse16; day4	+0.6
nutrient dropout	CDM1 without Lysine	+0.7
chicken	chicken 5; day 7; diet=StandardDiet; sample=FecalPellet	+0.7
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2	+0.7
nutrient dropout	CDM1 without Phenylalanine	+0.7
nutrient dropout	CDM1 without Adenine	+0.8
nutrient dropout	CDM1 without Lysine	+0.9
carbon source	reconstituted MRS with D-Galactose 56 mM	+4.6
carbon source	reconstituted MRS with D-Galactose 56 mM	+5.0
		remove BBR_RS15185