Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS14805
carbon source reconstituted MRS with Difucosyllactose 7.9 mM -1.0
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 -0.9
mouse preculture cage3; mouse1; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.9
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day1 -0.7
stress Recovery broth with Ciprofloxacin 0.1 mM -0.6
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 -0.6
mrs timecourse MRS Time48hr -0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 -0.5
stress Recovery broth with acetate 350 mM -0.5
stress Recovery broth with acetate 200 mM -0.5
supernatant CDM1Gut with 50% spent media from Bacteroides stercoris CC31F +0.5
nutrient dropout CDM1 without Isoleucine +0.5
nutrient dropout control CDM1 +0.5
nutrient dropout CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos +0.5
nutrient dropout CDM1 without Cyanocobalamin +0.5
nutrient dropout CDM1 without Histidine +0.5
nutrient dropout CDM1 without Glutamine +0.5
nutrient dropout CDM1 without Cytosine +0.5
nutrient dropout control CDM1 +0.5
nutrient dropout CDM1 without Pantothenate +0.6
nutrient dropout CDM1 without Arginine +0.6
nutrient dropout CDM1 without Uracil +0.6
nutrient dropout CDM1 without Proline +0.6
nutrient dropout CDM1 without Phenylalanine +0.6
nutrient dropout CDM1 without Isoleucine +0.7
nutrient dropout CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos +0.7
nutrient dropout CDM1 without Adenine +0.8
nutrient dropout control CDM1 +0.9
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4 +0.9
nutrient dropout CDM1 without Phenylalanine +1.0
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BBR_RS14805