Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS14590
stress Recovery broth with Levofloxacin 0.2 mM -1.2
stress Recovery broth with Ciprofloxacin 0.1 mM -1.1
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4 -1.1
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day4 -0.9
nutrient dropout CDM1 without Proline -0.9
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day3 -0.9
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day5 -0.9
carbon source reconstituted MRS with Difucosyllactose 7.9 mM -0.8
nutrient dropout CDM1 without Phenylalanine -0.8
stress Recovery broth with Serine hydroxamate 11 mM -0.7
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day5 -0.7
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day2 -0.7
mouse preculture cage3; mouse3; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.7
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day3 -0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5 -0.6
nutrient dropout CDM1 without Tryptophan -0.6
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day6 -0.6
nutrient dropout control CDM1 -0.6
nutrient dropout CDM1 without Asparagine -0.6
mouse mouse 15; day 1; diet=HighFatHighSugar; sample=FecalPellet -0.6
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day4 -0.6
mouse preculture cage3; mouse3; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.6
nutrient dropout control CDM1 -0.5
nutrient dropout CDM1 without Histidine -0.5
stress Recovery broth with Gentamicin 0.4 mM +0.5
mouse mouse 12; day 1; diet=HighFatHighSugar; sample=FecalPellet +0.5
chicken chicken 21; day 7; diet=StandardDiet; sample=Cecum +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 +0.6
chicken chicken 2; day 6; diet=StandardDiet; sample=FecalPellet +0.7
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 +0.8
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BBR_RS14590