Fitness for 1 genes in Bifidobacterium breve UCC2003

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BBR_RS14425
mouse preculture	cage3; mouse1; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-0.7
supernatant	CDM1Gut with 50% spent media from Escherichia fergusonnii TT2	-0.7
mouse	mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet	-0.7
mrs timecourse	MRS Time48hr	-0.7
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse13; day3	-0.6
nutrient dropout	CDM1 without Glycine	-0.5
nutrient dropout	CDM1 without Adenine	+0.4
stress	Recovery broth with Chenodeoxycholic 2.5 mM	+0.4
nutrient dropout	CDM1 without Histidine	+0.4
nutrient dropout	CDM1 without Guanine	+0.4
nutrient dropout	CDM1 without Cytosine	+0.5
nutrient dropout	CDM1 without Aspartate	+0.5
nutrient dropout	CDM1 without Methionine	+0.5
nutrient dropout	CDM1 without Proline	+0.5
mouse coculture	cage2; mouse2; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482	+0.5
stress	Recovery broth with 3-Acetylpyridine 0.04 mM	+0.5
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3	+0.5
nutrient dropout control	CDM1	+0.5
nutrient dropout	CDM1 without Glutamine	+0.5
nutrient dropout control	CDM1	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; mouse3; day5	+0.5
stress	Recovery broth with Thioridazine 0.1 mM	+0.5
stress	Recovery broth with Benzethonium chloride 0.1 mM	+0.5
nutrient dropout control	CDM1	+0.5
stress	Recovery broth with Ciprofloxacin 0.1 mM	+0.5
carbon source	reconstituted MRS with Difucosyllactose 7.9 mM	+0.6
nutrient dropout	CDM1 without FolicAcid	+0.6
chicken coculture	chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	+0.7
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3	+0.7
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5	+0.8
		remove BBR_RS14425