Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS13565
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3 -1.0
stress Recovery broth with Gentamicin 0.4 mM -0.8
stress Recovery broth with Benzethonium chloride 0.1 mM -0.6
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 -0.6
nutrient dropout control CDM1 -0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day2 +0.4
carbon source reconstituted MRS with Pectin 10 mg/ml +0.4
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day4 +0.4
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3 +0.4
stress Recovery broth with Thioridazine 0.1 mM +0.4
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day3 +0.4
nutrient dropout CDM1 without Phenylalanine +0.4
stress timecourse MRS + carbenicillin Time8hr +0.5
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron +0.5
nutrient dropout CDM1 without Serine +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day5 +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day2 +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day5 +0.5
mouse preculture cage3; mouse2; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 +0.5
mouse preculture cage3; mouse2; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.5
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day4 +0.5
chicken chicken 2; day 6; diet=StandardDiet; sample=FecalPellet +0.5
mouse mouse 12; day 1; diet=HighFatHighSugar; sample=FecalPellet +0.5
stress timecourse MRS + carbenicillin Time48hr +0.6
supernatant CDM1Gut with 50% spent media from Collinsella sp. 4_8_47FAA +0.6
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day3 +0.6
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day3 +0.7
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet +0.7
chicken chicken 2; day 5; diet=StandardDiet; sample=FecalPellet +0.9
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BBR_RS13565