Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS13540
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 -1.2
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day2 -0.8
nutrient dropout control CDM1 -0.7
nutrient dropout CDM1 without Proline -0.6
nutrient dropout CDM1 without Adenine -0.6
nutrient dropout control CDM1 -0.5
mrs timecourse MRS Time24hr -0.5
stress Recovery broth with Streptomycin 0.3 mM -0.5
stress Recovery broth with 3-Acetylpyridine 0.08 mM -0.5
stress Recovery broth with Gentamicin 0.4 mM -0.5
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day1 -0.5
stress control Recovery broth +0.5
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day4 +0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day4 +0.5
mouse preculture cage3; mouse2; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.5
carbon source reconstituted MRS with Difucosyllactose 7.9 mM +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day3 +0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day6 +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day5 +0.6
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day6 +0.6
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day4 +0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 +0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 +0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day3 +0.6
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day4 +0.7
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day4 +0.7
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4 +0.7
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5 +0.8
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 +0.9
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BBR_RS13540