Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS13200
nutrient dropout CDM1 without Pyridoxamine -2.7
nutrient dropout CDM1 without Pyridoxamine -2.5
stress Recovery broth with Serine hydroxamate 11 mM -1.6
stress timecourse MRS + kanamycin Time48hr -0.8
mouse coculture cage2; mouse2; day2; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482 -0.8
stress timecourse MRS + kanamycin Time48hr -0.8
nutrient dropout CDM1 without Phenylalanine -0.8
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.7
stress timecourse MRS + carbenicillin Time48hr -0.7
stress Recovery broth with Ciprofloxacin 0.1 mM -0.7
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet -0.7
stress Recovery broth with Norfloxacin 0.2 mM -0.6
nutrient dropout CDM1 without Serine -0.6
stress Recovery broth with D-Cycloserine 0.4 mM -0.6
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.6
nutrient dropout CDM1 without Tryptophan -0.5
stress Recovery broth with Chenodeoxycholic 1.3 mM -0.5
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day2 +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day2 +0.5
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day3 +0.5
stress Recovery broth with Cerulenin 0.9 mM +0.5
chicken chicken 2; day 6; diet=StandardDiet; sample=FecalPellet +0.5
stress Recovery broth with Bicyclomycin 0.07 mM +0.5
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day3 +0.6
chicken chicken 5; day 7; diet=StandardDiet; sample=FecalPellet +0.6
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 +0.7
stress Recovery broth with Ciprofloxacin 0.1 mM +0.7
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day3 +0.7
stress Recovery broth with Bicyclomycin 0.05 mM +0.8
stress Recovery broth with Nitrofurantoin 0.05 mM +1.2
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BBR_RS13200