Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS13095
carbon source reconstituted MRS with Lacto-N-tetraose 7.1 mM -6.5
carbon source reconstituted MRS with Lacto-N-tetraose 7.1 mM -4.2
carbon source reconstituted MRS with Lacto-N-fucopentaose II 5.9 mM -1.6
carbon source reconstituted MRS with Sialyllacto-N-tetraose a 5.0 mM -1.5
carbon source reconstituted MRS with Sialyllacto-N-tetraose a 5.0 mM -1.4
chicken coculture chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.9
carbon source reconstituted MRS with Lacto-N-fucopentaose I 5.9 mM -0.8
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.5
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.5
mouse preculture cage3; mouse3; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.5
nutrient dropout CDM1 without Lysine +0.4
nutrient dropout CDM1 without Methionine +0.4
nutrient dropout control CDM1 +0.4
nutrient dropout CDM1 without Leucine +0.4
nutrient dropout CDM1 without Guanine +0.4
nutrient dropout CDM1 without Cytosine +0.4
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 +0.4
nutrient dropout CDM1 without Leucine +0.4
mrs timecourse MRS Time48hr +0.4
nutrient dropout CDM1 without Pantothenate +0.4
nutrient dropout CDM1 without Isoleucine +0.4
nutrient dropout CDM1 without Arginine +0.4
nutrient dropout CDM1 without Proline +0.5
nutrient dropout CDM1 without Phenylalanine +0.5
nutrient dropout CDM1 without Cysteine +0.5
nutrient dropout CDM1 without Cyanocobalamin +0.5
nutrient dropout CDM1 without Cyanocobalamin +0.5
nutrient dropout CDM1 without Adenine +0.5
nutrient dropout CDM1 without Isoleucine +0.5
stress timecourse MRS + kanamycin Time48hr +0.5
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BBR_RS13095