Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS12935
carbon source reconstituted MRS with Difucosyllactose 7.9 mM -0.9
chicken chicken 1; day 2; diet=StandardDiet; sample=FecalPellet -0.5
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day4 -0.4
stress Recovery broth with Nitrofurantoin 0.05 mM -0.3
nutrient dropout CDM1 without Glycine -0.3
stress Recovery broth with Gentamicin 0.4 mM +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day3 +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day5 +0.3
nutrient dropout CDM1 without Nicotinate +0.3
mouse mouse 12; day 1; diet=HighFatHighSugar; sample=FecalPellet +0.3
mouse mouse 1; day 1; diet=StandardDiet; sample=FecalPellet +0.3
nutrient dropout CDM1 without Threonine +0.3
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet +0.3
nutrient dropout CDM1 without Asparagine +0.3
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day1 +0.3
nutrient dropout CDM1 without Serine +0.3
nutrient dropout CDM1 without Cyanocobalamin +0.4
mouse preculture cage3; mouse2; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.4
nutrient dropout CDM1 without Proline +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 +0.4
mouse mouse 11; day 1; diet=HighFatHighSugar; sample=FecalPellet +0.4
supernatant CDM1Gut with 50% spent media from Escherichia fergusonnii TT2 +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5 +0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day4 +0.5
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 +0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 +0.5
chicken chicken 2; day 6; diet=StandardDiet; sample=FecalPellet +0.6
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3 +0.6
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 +0.7
stress Recovery broth with Bicyclomycin 0.07 mM +0.7
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BBR_RS12935