Fitness for 1 genes in Bifidobacterium breve UCC2003

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Group Condition BBR_RS12185
carbon source reconstituted MRS with Difucosyllactose 7.9 mM -0.8
nutrient dropout CDM1 without Cytosine -0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day6 -0.6
nutrient dropout CDM1 without Glycine -0.6
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5 -0.5
nutrient dropout control CDM1 -0.5
nutrient dropout control CDM1 -0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 -0.4
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 -0.4
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4 -0.4
nutrient dropout CDM1 without Proline -0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 -0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day1 -0.4
nutrient dropout CDM1 without Uracil -0.4
nutrient dropout CDM1 without Adenine -0.3
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day3 -0.3
stress Recovery broth with Thioridazine 0.1 mM -0.3
nutrient dropout CDM1 without Arginine -0.3
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 -0.3
nutrient dropout CDM1 without Asparagine -0.3
chicken chicken 1; day 2; diet=StandardDiet; sample=FecalPellet -0.3
nutrient dropout CDM1 without Lysine -0.3
mrs timecourse MRS Time48hr +0.3
carbon source reconstituted MRS with ISOThrive-prebiotic lot A 0.5 %w/v +0.3
stress timecourse MRS + kanamycin Time24hr +0.3
stress Recovery broth with Levofloxacin 0.2 mM +0.3
stress timecourse MRS + carbenicillin Time48hr +0.3
stress Recovery broth with Bicyclomycin 0.07 mM +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day3 +0.4
mouse preculture cage3; mouse3; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.5
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BBR_RS12185