Fitness for 1 genes in Bifidobacterium breve UCC2003

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BBR_RS12135
stress	Recovery broth with 3-Acetylpyridine 0.04 mM	-0.4
nutrient dropout	CDM1 without Phenylalanine	-0.4
stress	Recovery broth with Levofloxacin 0.2 mM	-0.4
stress	Recovery broth with Ciprofloxacin 0.1 mM	-0.3
nutrient dropout	CDM1 without Phenylalanine	-0.3
nutrient dropout	CDM1 without Adenine	-0.3
mouse preculture	cage3; mouse3; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs	-0.3
nutrient dropout control	CDM1	-0.3
stress	MRS with Chenodeoxycholic 500 ug/ml	-0.3
chicken coculture	chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	-0.3
carbon source	reconstituted MRS with Amylopectin from maize 10 mg/ml	-0.3
nutrient dropout	CDM1 without Proline	-0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse4; day4	+0.3
mrs timecourse	MRS Time9hr	+0.3
stress timecourse	MRS + carbenicillin Time48hr	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day3	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day3	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse2; day5	+0.3
stress	Recovery broth with Gentamicin 0.4 mM	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day4	+0.3
nutrient dropout	CDM1 without Glycine	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day3	+0.3
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3	+0.3
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3	+0.4
stress timecourse	MRS + kanamycin Time48hr	+0.4
mrs timecourse	MRS Time48hr	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day4	+0.4
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse13; day3	+0.4
mouse	diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3	+0.4
stress timecourse	MRS + kanamycin Time48hr	+0.5
		remove BBR_RS12135