Fitness for 1 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004433
carbon source	Glucuronamide (C)	-2.3
carbon source	D-Glucuronic Acid (C)	-2.2
carbon source	Glucuronamide (C)	-2.1
carbon source	D-Glucuronic Acid (C)	-2.0
carbon source	Adenosine (C)	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	-0.5
r2a outgrowth control	R2A outgrowth control	-0.5
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.5
carbon source	D-Gluconic Acid (C)	-0.5
soil extract	Chlorogenic 5 mM in soil extract	-0.5
stress	RCH2_defined_glucose_5mM with Pyruvic 5 mM	-0.5
carbon source	2-Deoxy-D-Ribose (C)	-0.4
carbon source	D-Sorbitol (C)	-0.4
nitrogen source	histamine 5mM N source	-0.4
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A	-0.4
stress	R2A with Ethanol 2.5 vol%	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4
stress	RCH2_defined_glucose_5mM with Chlorogenic 1 mM	-0.4
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.4
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4
stress	M9 with Ethanol 2.5 vol%	+0.4
carbon source	Shikimic Acid 5 mM (C)	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.5
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.7
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