Fitness for 1 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001941
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-1.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-1.4
carbon source	D-Mannose (C)	-1.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.3
stress	RCH2_defined_glucose_5mM with Pyruvic 5 mM	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.1
stress	M9 with 3-methyl-2-butenol 2 g/L	-0.9
stress	R2A with Salicylic 10 uM	-0.9
stress	R2A with N-decanoyl-DL-Homoserine lactone 10 uM	-0.8
stress	M9 with 3-methyl-2-butenol 2 g/L	-0.8
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8
motility_chemotaxis	Motility_chemotaxis, R2A; inner cut	-0.8
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8
carbon source	Indole-3-pyruvic and Ethanols	-0.8
soil extract	D,L-Malic Acid 5 mM in soil extract	-0.8
stress	R2A with Tricalcium phosphate 0.5 g/L	-0.8
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	-0.8
mixed community	Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia	-0.7
carbon source	Acetylated xylan 10 g/L (C)	-0.7
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A	-0.7
stress control	RCH2_defined_glucose_5mM with hydroxide 1 mM	-0.7
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.7
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.7
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	-0.7
carbon source	L-Proline (C)	-0.7
carbon source	L-Phenylalanine (C)	+0.8
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+1.0
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