Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.6.1	Xcc-8004.8.1	Xcc-8004.9.1	Xcc-8004.10.1	Xcc-8004.11.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	-0.7	-0.8	-1.1	N.D.
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	N.D.	-0.7	-0.3	-1.1	N.D.
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	-0.2	-0.5	-1.1	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	-0.2	-0.5	-1.1	N.D.
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	-0.2	-0.5	-1.0	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	-0.3	-0.4	-1.0	N.D.
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	-0.2	-0.3	-1.1	N.D.
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	N.D.	-0.0	-0.6	-0.7	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	-0.4	-0.4	-0.5	N.D.
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	+0.1	-0.5	-0.9	N.D.
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	N.D.	-0.2	-0.3	-0.7	N.D.
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	N.D.	+0.1	-0.4	-0.9	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	-0.3	-0.3	-0.4	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	+0.1	-0.4	-0.6	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	-0.4	-0.1	-0.4	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	-0.1	-0.2	-0.5	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	-0.0	-0.2	-0.5	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	+0.1	-0.2	-0.7	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.4	-0.2	-0.1	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	-0.2	-0.2	-0.3	N.D.
clovis xylem sap	Clovis xylem sap	N.D.	-0.2	-0.1	-0.4	N.D.
carbon source	Citric Acid 10mM (C)	N.D.	-0.4	-0.2	+0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	-0.6	+0.3	-0.0	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	N.D.	+0.2	+0.1	-0.6	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	N.D.	+0.2	-0.0	-0.5	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.4	+0.2	-0.1	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.3	+0.3	-0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	-0.2	-0.1	+0.4	N.D.
carbon source	D-Glucose 16.67 mM (C)	N.D.	-0.0	-0.1	+0.8	N.D.
carbon source	Citric Acid 16.67 mM (C)	N.D.	+0.0	+0.7	+0.3	N.D.