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Protein
Homologs
Fitness for 5 genes in
Xanthomonas campestris pv. campestris strain 8004
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Xcc-8004.652.1 and Xcc-8004.653.1 are separated by 67 nucleotides
Xcc-8004.653.1 and Xcc-8004.654.1 are separated by 16 nucleotides
Xcc-8004.654.1 and Xcc-8004.656.1 are separated by 311 nucleotides
Xcc-8004.656.1 and Xcc-8004.657.1 are separated by 87 nucleotides
Xcc-8004.652.1: Xcc-8004.652.1 - 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51), at 593,067 to 594,989
Xcc-8004.652.1
Xcc-8004.653.1: Xcc-8004.653.1 - Transcriptional regulator, LysR family, at 595,057 to 595,959
Xcc-8004.653.1
Xcc-8004.654.1: Xcc-8004.654.1 - MFS permease protein, at 595,976 to 597,250
Xcc-8004.654.1
Xcc-8004.656.1: Xcc-8004.656.1 - FIG01209718: hypothetical protein, at 597,562 to 599,805
Xcc-8004.656.1
Xcc-8004.657.1: Xcc-8004.657.1 - Phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 599,893 to 601,188
Xcc-8004.657.1
Group
Condition
Xcc-8004.652.1
Xcc-8004.653.1
Xcc-8004.654.1
Xcc-8004.656.1
Xcc-8004.657.1
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
-0.2
+0.4
-0.3
-0.7
-4.3
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
-0.0
-0.1
+0.4
-0.1
-4.8
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
-0.3
+0.6
-0.1
-0.4
-4.4
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
-0.1
-0.3
+0.1
-0.0
-4.0
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
+0.2
-1.3
+0.1
+0.5
-3.7
carbon source
Citric Acid 10mM (C)
-0.6
+0.2
-0.1
+0.0
-3.6
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.1
-0.2
+0.1
-0.1
-3.5
in planta
1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
-0.0
-0.5
+0.1
+0.5
-3.8
clovis xylem sap
Clovis xylem sap
-0.1
-0.1
+0.1
-0.1
-3.6
clovis xylem sap
Clovis xylem sap
-0.1
-0.1
+0.2
-0.1
-3.7
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
-0.3
-0.2
+0.1
+0.3
-3.6
carbon source
Citric Acid 16.67 mM (C)
-0.3
+0.5
-0.1
-0.2
-3.0
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
+0.1
+0.1
+0.1
+0.1
-3.5
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
-0.0
-0.0
+0.0
+0.1
-3.1
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
+0.2
+0.3
-0.2
-0.3
-3.0
in planta
1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
+0.8
-0.6
+0.1
+0.1
-3.3
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
-0.1
-0.1
+0.0
-0.1
-2.6
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
+0.2
+0.4
-0.2
+0.5
-3.8
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.0
+0.1
+0.0
+0.2
-3.1
carbon source
D-Glucose 16.67 mM (C)
-0.2
+0.1
+0.0
+0.2
-3.0
clovis xylem sap
Clovis xylem sap
-0.0
+0.2
+0.2
+0.1
-3.3
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
-0.1
-0.2
-0.2
+0.1
-2.4
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
-0.0
-0.1
+0.1
-0.1
-2.6
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)
-0.1
+0.2
-0.0
+0.2
-3.0
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.0
-0.1
+0.0
+0.1
-2.8
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
+0.0
-0.2
+0.1
+0.2
-2.9
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
-0.1
+0.2
+0.3
+0.3
-3.2
carbon source
D-Fructose 16.67 mM (C)
-0.3
+0.5
-0.3
+0.2
-2.5
clovis xylem sap
Clovis xylem sap
-0.0
+0.3
+0.2
+0.0
-2.7
carbon source
Pectin from apple 2 g/L (C)
-0.2
+0.5
-0.1
+0.4
-2.9
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