Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

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500 ntXcc-8004.606.1 and Xcc-8004.607.1 are separated by 276 nucleotidesXcc-8004.607.1 and Xcc-8004.608.1 are separated by 482 nucleotidesXcc-8004.608.1 and Xcc-8004.609.1 overlap by 1 nucleotidesXcc-8004.609.1 and Xcc-8004.610.1 are separated by 13 nucleotides Xcc-8004.606.1: Xcc-8004.606.1 - Histone acetyltransferase HPA2 and related acetyltransferases, at 557,789 to 558,280 Xcc-8004.606.1 Xcc-8004.607.1: Xcc-8004.607.1 - hypothetical protein, at 558,557 to 559,582 Xcc-8004.607.1 Xcc-8004.608.1: Xcc-8004.608.1 - Anthranilate synthase, aminase component (EC 4.1.3.27), at 560,065 to 561,540 Xcc-8004.608.1 Xcc-8004.609.1: Xcc-8004.609.1 - hypothetical protein, at 561,540 to 562,610 Xcc-8004.609.1 Xcc-8004.610.1: Xcc-8004.610.1 - putative; ORF located using Glimmer/Genemark, at 562,624 to 562,989 Xcc-8004.610.1
Group Condition Xcc-8004.606.1 Xcc-8004.607.1 Xcc-8004.608.1 Xcc-8004.609.1 Xcc-8004.610.1
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.1 +0.3 -4.6 -0.5 +0.2
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.0 +0.4 -4.1 -0.3 -0.4
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.2 -0.3 -2.6 -1.2 -0.2
carbon source Citric Acid 10mM (C) +0.3 -0.5 -3.3 +0.4 -0.7
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.0 -0.2 -3.2 -0.8 +0.7
carbon source Pectin from apple 2 g/L (C) -0.2 -0.3 -2.7 +0.2 -0.4
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH +0.1 +0.1 -3.6 +0.1 +0.0
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.3 +0.2 -3.0 +1.1 -1.3
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.1 -0.2 -2.7 -0.6 +0.3
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.1 -0.1 -1.6 -0.6 -1.0
carbon source D-Glucose 16.67 mM (C) -0.0 -0.0 -2.9 -0.1 +0.0
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days +0.0 -0.2 -2.5 +0.0 -0.4
carbon source Citric Acid 16.67 mM (C) -0.2 +0.2 -2.6 -0.1 -0.3
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.0 +0.5 -2.4 -0.2 -0.8
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.1 +0.1 -1.7 -0.8 -0.4
carbon source D-Fructose 16.67 mM (C) -0.0 +0.1 -2.8 +0.1 -0.2
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.0 +0.1 -2.9 -0.1 +0.1
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.0 -0.1 -1.3 -1.9 +0.6
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH +0.1 +0.4 -3.5 -0.6 +0.9
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) +0.3 -0.4 -2.9 +0.1 +0.3
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.3 -0.2 -1.5 -0.2 -0.5
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.2 +0.0 -3.4 +0.7 +0.8
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.1 +0.2 -3.4 +0.4 +0.7
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.5 +0.2 -2.4 -0.4 +0.1
in planta xylem Xylemvessel barcodes T0L1P4 +0.1 -0.1 -0.4 -1.8 +0.3
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH +0.2 +0.2 -2.2 +0.2 -0.2
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.1 +0.7 -1.3 +0.3 +0.3
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.3 +0.5 -2.8 +1.4 +0.8
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.9 +0.7 -2.5 +0.3 +1.1
r2a control R2A control -0.2 +0.2 +1.0 -0.9 +0.6
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