Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.5346.1	Xcc-8004.5347.1	Xcc-8004.5348.1	Xcc-8004.5349.1	Xcc-8004.5350.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.2	+0.0	-0.3	-1.3	+0.3
in planta xylem	Xylemvessel barcodes T0L2P4	-1.2	+0.0	-0.1	-0.5	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8	-0.3	-0.4	-0.0	+0.0
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.4	-0.1	+0.0	-1.3	-0.2
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.5	+0.2	-0.1	-0.7	+0.2
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.5	-0.0	-0.2	-0.4	+0.4
in planta xylem	Xylemvessel barcodes T0L1P3	+0.5	+0.2	+0.1	-1.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9	+0.1	-0.3	+1.0	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9	+0.0	+0.0	+0.4	-0.0
in planta xylem	Xylemvessel barcodes T0L1P4	-0.9	-0.2	+0.2	+0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	+0.1	+0.1	-1.0	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.1	-0.4	+0.7	-0.4
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	+0.9	-0.1	-0.0	-0.5	-0.4
carbon source	Citric Acid 16.67 mM (C)	-0.6	+0.1	-0.1	+0.1	+0.4
clovis xylem sap	Clovis xylem sap	+0.7	-0.1	+0.0	-0.3	-0.2
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.2	-0.1	-0.3	+0.7	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.1	-0.1	+1.0	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	-0.1	-0.2	+1.0	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.2	-0.1	-0.2	+1.0	-0.1
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.5	+0.1	-0.1	+0.5	-0.1
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	+0.5	+0.1	+0.0	+0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.6	-0.0	-0.5	+0.5	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3	+0.1	-0.1	+0.8	-0.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.0	+0.0	-0.1	+1.0	+0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.5	+0.1	-0.1	+0.6	+0.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.1	+0.1	-0.1	+0.8	+0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.2	+0.3	+0.2	+0.7	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.1	+0.3	-0.1	+1.1	+0.1
r2a control	R2A control	+0.4	+0.0	-0.1	+1.6	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	+0.0	+0.1	+1.6	-0.1