Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.5277.1	Xcc-8004.5278.1	Xcc-8004.5280.1	Xcc-8004.5281.1	Xcc-8004.5286.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.0	-0.4	-2.1	-0.2	+0.2
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.3	-0.2	-1.0	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.1	-1.6	-0.0	-0.1
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.6	-0.3	-0.6	+0.0	-0.2
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.1	-0.7	-0.9	-0.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.2	-1.2	-0.1	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.2	-1.5	-0.2	+0.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.3	+0.3	-1.2	+0.1	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.2	-1.4	-0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.3	-1.0	-0.2	+0.1
in planta xylem	Xylemvessel barcodes T0L1P4	-0.3	+0.6	-0.9	-0.4	+0.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.2	+0.1	-1.1	-0.0	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-0.1	-1.0	+0.1	-0.0
carbon source	Citric Acid 10mM (C)	-0.1	+0.5	-1.5	+0.2	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-0.4	-0.3	-0.2	-0.1
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.1	+0.2	-0.8	-0.2	-0.0
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	+0.0	+0.1	-0.8	-0.1	+0.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.3	-0.3	+0.0	-0.3	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.0	+0.1	-0.9	+0.1	+0.2
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.3	-0.2	-0.5	-0.2	+0.0
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.2	-0.0	-0.7	+0.0	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.2	+0.3	-0.8	-0.1	+0.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.1	+0.3	-0.6	-0.1	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.3	+0.1	-0.5	-0.1	+0.3
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.8	+0.1	-0.6	+0.0	-0.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.3	+0.3	-0.6	+0.1	+0.2
r2a control	R2A control	+0.6	+0.2	-0.4	+0.0	+0.4
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.0	+0.8	+0.2	-0.1	-0.1
in planta xylem	Xylemvessel barcodes T0L1P3	-0.3	+0.6	+0.7	+0.3	-0.1
in planta xylem	Xylemvessel barcodes T0L2P4	+0.1	+0.4	+0.6	-0.0	+0.2