Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

500 ntXcc-8004.4980.1 and Xcc-8004.4982.1 are separated by 153 nucleotidesXcc-8004.4982.1 and Xcc-8004.4983.1 are separated by 232 nucleotidesXcc-8004.4983.1 and Xcc-8004.4984.1 are separated by 76 nucleotidesXcc-8004.4984.1 and Xcc-8004.4985.1 are separated by 110 nucleotides Xcc-8004.4980.1: Xcc-8004.4980.1 - Tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 4,729,045 to 4,730,340 Xcc-8004.4980.1 Xcc-8004.4982.1: Xcc-8004.4982.1 - Protein yjbJ, at 4,730,494 to 4,730,703 Xcc-8004.4982.1 Xcc-8004.4983.1: Xcc-8004.4983.1 - hypothetical protein, at 4,730,936 to 4,731,070 Xcc-8004.4983.1 Xcc-8004.4984.1: Xcc-8004.4984.1 - hypothetical protein, at 4,731,147 to 4,731,299 Xcc-8004.4984.1 Xcc-8004.4985.1: Xcc-8004.4985.1 - Arginase (EC 3.5.3.1), at 4,731,410 to 4,732,333 Xcc-8004.4985.1
Group Condition Xcc-8004.4980.1 Xcc-8004.4982.1 Xcc-8004.4983.1 Xcc-8004.4984.1 Xcc-8004.4985.1
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH N.D. -0.8 N.D. -0.8 -2.0
in planta xylem Xylemvessel barcodes T0L1P3 N.D. -2.6 N.D. +0.1 -0.2
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH N.D. -0.6 N.D. -0.3 -1.2
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) N.D. -2.3 N.D. +0.1 +0.1
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) N.D. -2.3 N.D. +0.4 -0.1
carbon source Citric Acid 10mM (C) N.D. +0.3 N.D. -2.0 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -1.8 N.D. -0.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.9 N.D. -0.7 -0.0
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) N.D. -0.1 N.D. -1.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.5 N.D. -1.0 -0.1
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH N.D. -0.0 N.D. -0.2 -1.3
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x N.D. -0.9 N.D. -0.5 -0.1
clovis xylem sap Clovis xylem sap N.D. -1.0 N.D. -0.3 -0.0
carbon source Citric Acid 16.67 mM (C) N.D. +0.5 N.D. -0.5 -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. +0.3 N.D. -1.8 +0.3
clovis xylem sap Clovis xylem sap N.D. -0.4 N.D. +0.2 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. +0.4 N.D. -1.1 -0.2
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days N.D. -1.5 N.D. +0.9 -0.2
in planta xylem Xylemvessel barcodes T0L2P4 N.D. +0.4 N.D. -1.1 -0.2
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH N.D. +0.5 N.D. -0.2 -1.0
in planta xylem Xylemvessel barcodes T0L1P4 N.D. -1.0 N.D. +0.5 +0.1
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) N.D. +1.1 N.D. -0.8 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. +0.6 N.D. -0.5 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. +1.7 N.D. -1.4 +0.1
carbon source D-Fructose 16.67 mM (C) N.D. +0.9 N.D. -0.5 +0.1
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) N.D. +1.0 N.D. -0.5 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.3 N.D. -0.5 +0.0
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) N.D. +1.0 N.D. +0.3 -0.4
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) N.D. +1.4 N.D. -0.5 +0.1
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) N.D. +0.9 N.D. +0.9 +0.1
remove
Xcc-8004.4980.1
plot		 remove
Xcc-8004.4982.1
plot		 remove
Xcc-8004.4983.1		 remove
Xcc-8004.4984.1
plot		 remove
Xcc-8004.4985.1
plot