Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

500 ntXcc-8004.4870.1 and Xcc-8004.4871.1 are separated by 84 nucleotidesXcc-8004.4871.1 and Xcc-8004.4872.1 are separated by 55 nucleotidesXcc-8004.4872.1 and Xcc-8004.4876.1 are separated by 7117 nucleotidesXcc-8004.4876.1 and Xcc-8004.4877.1 are separated by 172 nucleotides Xcc-8004.4870.1: Xcc-8004.4870.1 - Mobile element protein, at 4,628,502 to 4,629,482 Xcc-8004.4870.1 Xcc-8004.4871.1: Xcc-8004.4871.1 - Phage tail completion protein, at 4,629,567 to 4,629,686 Xcc-8004.4871.1 Xcc-8004.4872.1: Xcc-8004.4872.1 - Mobile element protein, at 4,629,742 to 4,631,166 Xcc-8004.4872.1 Xcc-8004.4876.1: Xcc-8004.4876.1 - Tyrosyl-tRNA synthetase (EC 6.1.1.1), at 4,638,284 to 4,639,495 Xcc-8004.4876.1 Xcc-8004.4877.1: Xcc-8004.4877.1 - Membrane proteins related to metalloendopeptidases, at 4,639,668 to 4,641,086 Xcc-8004.4877.1
Group Condition Xcc-8004.4870.1 Xcc-8004.4871.1 Xcc-8004.4872.1 Xcc-8004.4876.1 Xcc-8004.4877.1
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x N.D. -1.0 N.D. N.D. -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -1.8 N.D. N.D. -0.3
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) N.D. -1.9 N.D. N.D. -0.2
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x N.D. -0.3 N.D. N.D. -1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.5 N.D. N.D. +0.1
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) N.D. -1.1 N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -1.0 N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -0.9 N.D. N.D. -0.3
control PBS control N.D. -0.5 N.D. N.D. -0.6
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) N.D. -1.0 N.D. N.D. -0.1
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x N.D. -0.3 N.D. N.D. -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.9 N.D. N.D. -0.1
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) N.D. -1.0 N.D. N.D. +0.1
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x N.D. +0.5 N.D. N.D. -1.4
carbon source Citric Acid 16.67 mM (C) N.D. +1.1 N.D. N.D. -1.9
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x N.D. +0.2 N.D. N.D. -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.4 N.D. N.D. -0.6
control PBS control N.D. +0.4 N.D. N.D. -0.5
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x N.D. +0.5 N.D. N.D. -0.7
supernatant Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x N.D. +0.7 N.D. N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. +0.6 N.D. N.D. -0.6
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) N.D. +0.7 N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. +0.7 N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.8 N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. +0.9 N.D. N.D. -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.8 N.D. N.D. +0.0
in planta xylem Xylemvessel barcodes T1L3P4 N.D. +0.7 N.D. N.D. +0.3
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) N.D. +0.9 N.D. N.D. +0.1
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X N.D. +0.5 N.D. N.D. +0.5
in planta xylem Xylemvessel barcodes T0L2P4 N.D. +1.0 N.D. N.D. +0.3
remove
Xcc-8004.4870.1
plot		 remove
Xcc-8004.4871.1
plot		 remove
Xcc-8004.4872.1		 remove
Xcc-8004.4876.1
plot		 remove
Xcc-8004.4877.1
plot