Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.4734.1	Xcc-8004.4735.1	Xcc-8004.4736.1	Xcc-8004.4737.1	Xcc-8004.4738.1
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	-0.2	-0.0	-3.6	-3.7
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	N.D.	+0.1	-0.0	-3.6	-3.8
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	-0.3	-0.2	-3.0	-3.6
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	N.D.	+0.2	+0.0	-3.9	-3.4
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	-0.4	-0.3	-3.7	-2.5
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	-1.0	-0.2	-2.9	-2.5
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	-0.2	-0.0	-3.4	-2.7
in planta xylem	Xylemvessel barcodes T0L1P3	N.D.	+0.8	-0.1	-3.6	-2.9
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	N.D.	-0.6	-0.2	-2.3	-2.5
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	N.D.	+0.2	-0.0	-3.0	-2.6
clovis xylem sap	Clovis xylem sap	N.D.	-0.3	-0.2	-2.9	-2.0
in planta xylem	Xylemvessel barcodes T1L3P4	N.D.	-0.1	+0.1	-1.7	-3.4
in planta xylem	Xylemvessel barcodes T0L2P4	N.D.	-0.2	-0.3	-1.6	-2.8
clovis xylem sap	Clovis xylem sap	N.D.	-0.1	+0.1	-0.6	-4.1
clovis xylem sap	Clovis xylem sap	N.D.	-0.1	-0.0	-2.2	-2.3
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	+0.2	-0.2	-1.7	-2.9
in planta xylem	Xylemvessel barcodes T0L1P4	N.D.	-0.6	-0.0	-0.8	-3.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	N.D.	-0.3	-0.0	-1.9	-2.0
clovis xylem sap	Clovis xylem sap	N.D.	+0.1	-0.0	-2.5	-1.6
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	N.D.	-0.0	-0.1	-2.2	-1.8
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	N.D.	-0.6	+0.1	-2.2	-1.4
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	+0.3	-0.3	-1.7	-2.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	N.D.	-0.4	-0.1	-1.3	-2.3
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	N.D.	+0.0	-0.1	-1.7	-1.6
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	N.D.	-0.1	-0.1	-1.6	-1.4
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	N.D.	+0.3	-0.1	-2.2	-1.2
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	N.D.	+0.2	+0.0	-2.2	-1.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	N.D.	+0.2	-0.0	-1.3	-1.9
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	N.D.	+0.2	+0.1	-1.8	-1.4
carbon source	Citric Acid 10mM (C)	N.D.	-0.4	-0.1	+2.5	+1.7