Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.4707.1	Xcc-8004.4708.1	Xcc-8004.4709.1	Xcc-8004.4710.1	Xcc-8004.4711.1
in planta xylem	Xylemvessel barcodes T0L1P4	-0.5	+0.1	-0.2	-1.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	-0.0	-0.2	-1.0	N.D.
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.7	-0.7	+0.3	-1.3	N.D.
in planta xylem	Xylemvessel barcodes T0L2P4	+0.3	-0.1	+0.4	-1.6	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.9	-0.6	-0.2	+0.9	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.1	-0.2	+0.2	-0.8	N.D.
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.5	-0.8	-0.2	+0.9	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7	+0.1	-0.5	-1.0	N.D.
in planta xylem	Xylemvessel barcodes T0L1P3	+0.2	+0.1	+0.3	-1.1	N.D.
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	+0.3	-0.8	-0.0	+0.2	N.D.
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.3	-0.3	+0.2	-0.6	N.D.
carbon source	Citric Acid 10mM (C)	-0.6	+0.5	-0.1	+0.2	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-0.1	-0.1	-0.3	+0.6	N.D.
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x	-0.1	+0.5	+0.3	-0.6	N.D.
clovis xylem sap	Clovis xylem sap	-0.0	+0.8	-0.1	-0.5	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	-0.5	+0.0	+0.6	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+0.3	+0.4	-0.7	N.D.
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.3	+0.0	+0.5	-0.6	N.D.
in planta xylem	Xylemvessel barcodes T1L3P4	+0.1	+0.4	+0.2	-0.5	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	+0.4	-0.3	+0.4	N.D.
carbon source	Citric Acid 16.67 mM (C)	+0.1	+0.6	+0.2	-0.3	N.D.
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x	+0.5	+0.4	+0.0	-0.3	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4	+0.5	-0.2	+0.0	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5	+0.4	-0.2	+0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5	-0.3	+0.4	+0.2	N.D.
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.3	-0.6	-0.4	+1.8	N.D.
control	PBS control	+0.4	+0.8	+0.0	+0.1	N.D.
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.6	-0.1	+0.1	+0.8	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	+0.3	+0.1	-0.2	+1.6	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.1	+0.4	+1.4	N.D.