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Protein
Homologs
Fitness for 5 genes in
Xanthomonas campestris pv. campestris strain 8004
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Xcc-8004.4434.1 and Xcc-8004.4435.1 are separated by 110 nucleotides
Xcc-8004.4435.1 and Xcc-8004.4437.1 are separated by 532 nucleotides
Xcc-8004.4437.1 and Xcc-8004.4439.1 are separated by 856 nucleotides
Xcc-8004.4439.1 and Xcc-8004.4440.1 are separated by 334 nucleotides
Xcc-8004.4434.1: Xcc-8004.4434.1 - Protease, at 4,241,556 to 4,243,484
Xcc-8004.4434.1
Xcc-8004.4435.1: Xcc-8004.4435.1 - hypothetical protein, at 4,243,595 to 4,250,650
Xcc-8004.4435.1
Xcc-8004.4437.1: Xcc-8004.4437.1 - hypothetical protein, at 4,251,183 to 4,251,293
Xcc-8004.4437.1
Xcc-8004.4439.1: Xcc-8004.4439.1 - Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3), at 4,252,150 to 4,256,193
Xcc-8004.4439.1
Xcc-8004.4440.1: Xcc-8004.4440.1 - Thiol:disulfide interchange protein DsbC, at 4,256,528 to 4,257,322
Xcc-8004.4440.1
Group
Condition
Xcc-8004.4434.1
Xcc-8004.4435.1
Xcc-8004.4437.1
Xcc-8004.4439.1
Xcc-8004.4440.1
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
-0.2
+0.1
-1.0
-4.2
-0.3
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
+0.1
+0.2
-0.7
-4.5
-0.1
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
+0.0
-0.0
-0.2
-4.2
-0.7
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
+0.1
+0.1
-0.6
-3.7
-0.6
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
-0.0
-0.1
+0.2
-3.9
-0.8
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
+0.1
+0.2
+0.0
-4.0
-0.5
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)
+0.0
+0.2
+0.3
-3.9
-0.8
clovis xylem sap
Clovis xylem sap
+0.0
+0.0
-0.1
-3.7
-0.1
in planta
1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
+0.0
+0.1
+0.4
-3.6
-0.7
carbon source
Citric Acid 16.67 mM (C)
+0.1
+0.1
-0.1
-3.5
-0.3
carbon source
D-Fructose 16.67 mM (C)
+0.0
-0.1
-0.1
-3.9
+0.3
carbon source
D-Glucose 16.67 mM (C)
+0.1
+0.1
-0.3
-3.8
+0.2
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
+0.0
+0.0
-0.0
-3.8
+0.0
clovis xylem sap
Clovis xylem sap
+0.1
+0.1
-0.1
-3.6
+0.0
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
-0.1
+0.2
-0.1
-3.1
-0.4
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.1
+0.0
+0.1
-3.4
-0.0
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
+0.0
+0.2
+0.5
-3.4
-0.7
clovis xylem sap
Clovis xylem sap
+0.0
+0.0
+0.2
-3.5
-0.1
clovis xylem sap
Clovis xylem sap
+0.1
+0.1
-0.0
-3.5
+0.1
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
+0.0
-0.0
-0.1
-3.1
-0.1
carbon source
Citric Acid 10mM (C)
+0.1
-0.0
-0.1
-3.4
+0.3
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
+0.1
-0.0
-0.0
-2.7
-0.4
carbon source
Pectin from apple 2 g/L (C)
+0.2
+0.1
+0.0
-3.5
+0.1
xantho_mme_glucose_dropout_lth
Xantho_MME_glucose_dropout_LTH
+0.0
+0.0
+0.0
-3.0
-0.1
in planta
1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
+0.4
+0.3
+0.4
-3.1
-1.0
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days
+0.1
+0.0
-0.2
-2.6
-0.3
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
+0.2
+0.1
+0.3
-3.1
-0.4
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
+0.0
+0.0
+0.3
-2.7
-0.2
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
-0.0
+0.1
-0.0
-2.3
-0.4
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
-0.1
+0.0
+0.1
-2.0
-0.4
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Xcc-8004.4437.1
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