Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.4204.1	Xcc-8004.4205.1	Xcc-8004.4206.1	Xcc-8004.4207.1	Xcc-8004.4208.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-2.6	N.D.	+0.4	-0.0	-0.2
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-2.2	N.D.	+0.1	+0.1	-0.4
in planta xylem	Xylemvessel barcodes T0L1P3	-2.4	N.D.	+0.2	-0.0	-0.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-2.4	N.D.	-0.1	+0.4	-0.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-2.2	N.D.	+0.2	-0.1	-0.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-1.9	N.D.	-0.1	+0.3	-0.1
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-1.9	N.D.	-0.1	+0.2	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.3	N.D.	-0.1	-0.1	-0.1
clovis xylem sap	Clovis xylem sap	-1.6	N.D.	+0.2	-0.2	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.5	N.D.	-0.0	+0.0	+0.0
carbon source	Pectin from apple 2 g/L (C)	-1.4	N.D.	+0.1	-0.1	+0.1
in planta xylem	Xylemvessel barcodes T0L2P4	-1.3	N.D.	+0.1	-0.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.1	N.D.	-0.0	+0.1	+0.0
in planta xylem	Xylemvessel barcodes T0L1P4	-1.3	N.D.	-0.1	+0.2	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3	N.D.	+0.2	+0.1	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.7	N.D.	-0.1	-0.3	+0.0
carbon source	Citric Acid 10mM (C)	-1.4	N.D.	+0.3	-0.0	+0.2
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	-1.3	N.D.	+0.1	+0.3	-0.1
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.8	N.D.	-0.3	+0.1	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.1	N.D.	+0.3	+0.1	-0.3
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-0.9	N.D.	-0.1	+0.1	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.0	N.D.	+0.0	+0.2	+0.0
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-0.6	N.D.	-0.3	+0.1	+0.0
moka	MOKA	-0.8	N.D.	+0.1	+0.0	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.1	N.D.	+0.3	+0.2	-0.0
in planta xylem	Xylemvessel barcodes T1L3P4	-0.6	N.D.	-0.1	+0.1	+0.1
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.8	N.D.	+0.0	+0.3	+0.0
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-0.7	N.D.	+0.2	+0.1	+0.2
carbon source	Citric Acid 16.67 mM (C)	-1.0	N.D.	+0.5	+0.2	+0.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	+0.9	N.D.	+0.2	+0.3	+0.0