Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.4199.1	Xcc-8004.4200.1	Xcc-8004.4201.1	Xcc-8004.4203.1	Xcc-8004.4204.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-1.4	-3.1	N.D.	+0.1	-2.2
in planta xylem	Xylemvessel barcodes T1L3P4	-0.8	-4.8	N.D.	-0.3	-0.6
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-0.8	-4.2	N.D.	-0.7	-0.7
carbon source	D-Fructose 16.67 mM (C)	-1.3	-4.2	N.D.	+0.1	-0.7
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-1.0	-2.7	N.D.	+0.3	-2.2
carbon source	D-Glucose 16.67 mM (C)	-1.9	-3.5	N.D.	+0.0	-0.0
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-1.6	-3.3	N.D.	+0.3	-0.8
carbon source	Citric Acid 10mM (C)	-1.4	-2.3	N.D.	-0.3	-1.4
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.9	-2.6	N.D.	+0.2	-1.9
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-1.4	-1.0	N.D.	-0.1	-2.6
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-1.1	-2.1	N.D.	+0.2	-1.9
in planta xylem	Xylemvessel barcodes T0L2P4	-0.9	-2.3	N.D.	-0.3	-1.3
in planta xylem	Xylemvessel barcodes T0L1P3	-1.4	-1.1	N.D.	+0.2	-2.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-3.8	N.D.	-0.1	+0.4
carbon source	Citric Acid 16.67 mM (C)	-0.9	-2.3	N.D.	+0.1	-1.0
in planta xylem	Xylemvessel barcodes T0L1P4	-1.2	-1.7	N.D.	+0.1	-1.3
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	-0.8	-2.3	N.D.	+0.4	-1.3
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	-1.1	-2.5	N.D.	+0.1	-0.4
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.8	-0.6	N.D.	+0.1	-2.4
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.7	-2.5	N.D.	-0.0	-0.3
carbon source	Pectin from apple 2 g/L (C)	-0.4	-1.6	N.D.	-0.2	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0	-2.4	N.D.	+0.2	-0.2
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-1.1	-1.9	N.D.	-0.1	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.1	-2.3	N.D.	-0.2	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-1.3	N.D.	-0.0	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6	-2.0	N.D.	+0.3	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.3	-2.2	N.D.	+0.3	-0.4
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-1.3	-1.9	N.D.	+0.0	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.2	-1.9	N.D.	-0.0	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5	+0.8	N.D.	+0.3	-1.3