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Homologs
Fitness for 5 genes in
Xanthomonas campestris pv. campestris strain 8004
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Xcc-8004.4069.1 and Xcc-8004.4070.1 are separated by 123 nucleotides
Xcc-8004.4070.1 and Xcc-8004.4071.1 are separated by 114 nucleotides
Xcc-8004.4071.1 and Xcc-8004.4072.1 are separated by 235 nucleotides
Xcc-8004.4072.1 and Xcc-8004.4073.1 are separated by 31 nucleotides
Xcc-8004.4069.1: Xcc-8004.4069.1 - FIG01211525: hypothetical protein, at 3,926,303 to 3,926,731
Xcc-8004.4069.1
Xcc-8004.4070.1: Xcc-8004.4070.1 - peptidyl-Asp metalloendopeptidase, at 3,926,855 to 3,928,108
Xcc-8004.4070.1
Xcc-8004.4071.1: Xcc-8004.4071.1 - hypothetical protein, at 3,928,223 to 3,928,480
Xcc-8004.4071.1
Xcc-8004.4072.1: Xcc-8004.4072.1 - COG2833: uncharacterized protein, at 3,928,716 to 3,929,564
Xcc-8004.4072.1
Xcc-8004.4073.1: Xcc-8004.4073.1 - Amidophosphoribosyltransferase (EC 2.4.2.14), at 3,929,596 to 3,931,062
Xcc-8004.4073.1
Group
Condition
Xcc-8004.4069.1
Xcc-8004.4070.1
Xcc-8004.4071.1
Xcc-8004.4072.1
Xcc-8004.4073.1
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
+0.2
-0.9
-1.1
-0.1
-3.3
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
-0.2
+0.2
-0.5
-0.3
-3.7
in planta
1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
-0.2
+0.2
-0.0
-0.4
-3.9
in planta xylem
Xylemvessel barcodes Location 3 6 dpi (25 plantes)
+0.4
+0.2
+0.1
-0.2
-4.7
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.7
+0.2
+0.1
+0.2
-3.8
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
-0.1
-0.3
-0.6
-0.3
-2.6
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
-0.4
+0.4
-0.3
+0.2
-3.8
carbon source
Citric Acid 16.67 mM (C)
+0.1
+0.2
-0.7
-0.5
-2.8
clovis xylem sap
Clovis xylem sap
-0.2
+0.1
+0.0
+0.3
-3.8
carbon source
D-Glucose 16.67 mM (C)
-0.1
-0.2
-0.2
+0.2
-3.5
carbon source
D-Fructose 16.67 mM (C)
-0.1
-0.0
+0.1
-0.0
-3.5
clovis xylem sap
Clovis xylem sap
+0.0
+0.1
-0.1
-0.2
-3.3
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days
-0.7
+0.0
+0.1
-0.0
-2.8
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
-0.3
+0.4
-0.2
-0.4
-2.7
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
+0.6
-0.2
-0.4
+0.4
-3.5
in planta
1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)
+0.3
+0.3
+0.1
-0.2
-3.5
carbon source
Citric Acid 10mM (C)
-0.3
+0.1
+0.4
+0.2
-3.3
clovis xylem sap
Clovis xylem sap
-0.2
+0.2
-0.2
+0.2
-2.8
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.8
+0.4
+0.2
+0.2
-2.8
carbon source
Pectin from apple 2 g/L (C)
-0.1
-0.1
+0.5
+0.0
-2.9
in planta xylem
Xylemvessel barcodes Location 3 4 dpi (25 plantes)
-0.0
+0.6
+0.2
+0.1
-3.3
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
-0.3
+0.5
-0.6
-0.5
-1.6
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.1
+0.4
-0.6
+0.1
-2.3
clovis xylem sap
Clovis xylem sap
+0.1
+0.2
+0.8
+0.0
-3.5
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
-0.5
-0.0
+0.0
+0.4
-2.2
in planta mesophyll
Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days
+0.1
+0.3
+0.2
+0.7
-3.4
in planta
1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)
+0.4
+0.1
+0.9
+0.5
-4.0
xantho_mme_glucose_casamino
Xantho_MME_glucose_casamino
-0.1
+0.3
+0.1
+0.1
-2.6
in planta xylem
Xylemvessel barcodes Location 2 4 dpi (25 plantes)
+0.5
+0.3
-0.3
-0.3
-1.7
in planta xylem
Xylemvessel barcodes Location 2 6 dpi (25 plantes)
+0.7
+0.3
+0.2
-0.2
-2.3
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