Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.4020.1	Xcc-8004.4021.1	Xcc-8004.4022.1	Xcc-8004.4023.1	Xcc-8004.4024.1
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.5	-0.5	-0.3	N.D.	-3.0
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.1	-0.7	-0.2	N.D.	-3.0
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	-0.2	-0.2	-0.5	N.D.	-3.1
in planta	1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.2	-0.4	-0.2	N.D.	-2.9
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.2	-0.4	-0.3	N.D.	-2.6
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.5	-0.3	-0.3	N.D.	-1.8
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	+0.0	+0.5	-0.0	N.D.	-3.1
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.3	+0.4	-0.6	N.D.	-1.9
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-0.5	-0.4	+0.0	N.D.	-1.4
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.2	+0.4	-0.2	N.D.	-2.1
carbon source	D-Glucose 16.67 mM (C)	-0.3	+0.1	-0.2	N.D.	-1.7
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-0.8	-0.0	+0.0	N.D.	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.2	+0.0	N.D.	-1.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	-0.2	-0.2	N.D.	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	-0.2	+0.0	N.D.	-1.9
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-0.1	+0.1	+0.2	N.D.	-2.1
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.3	+0.0	-0.1	N.D.	-1.5
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-0.4	+0.3	-0.7	N.D.	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.1	-0.2	N.D.	-1.4
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.4	+0.2	-0.3	N.D.	-1.2
clovis xylem sap	Clovis xylem sap	-0.2	+0.2	-0.2	N.D.	-1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	-0.1	+0.1	N.D.	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	-0.2	-0.1	N.D.	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	+0.0	+0.1	N.D.	-1.6
clovis xylem sap	Clovis xylem sap	+0.1	-0.2	+0.0	N.D.	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	+0.3	-0.1	N.D.	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+0.3	+0.2	N.D.	-1.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+0.4	+0.1	N.D.	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	+0.6	+0.2	N.D.	-0.7
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.0	+0.4	+0.6	N.D.	-0.6