Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.3968.1	Xcc-8004.3970.1	Xcc-8004.3974.1	Xcc-8004.3975.1	Xcc-8004.3976.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7	-0.1	+0.2	-0.1	-4.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.4	-0.1	-0.2	-0.1	-3.0
in planta xylem	Xylemvessel barcodes T0L1P4	-1.7	-0.2	-0.4	-0.1	-2.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-0.1	-0.2	-0.1	-3.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	-0.0	-0.0	-0.0	-3.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7	+0.0	+0.1	-0.2	-3.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	-0.0	-0.4	-0.1	-2.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.1	-0.1	-0.1	-2.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.4	+0.2	+0.3	-0.1	-2.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8	-0.1	+0.5	-0.1	-2.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4	-0.0	+0.1	+0.0	-3.0
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together)	-0.8	-0.0	-0.1	-0.1	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9	-0.1	+0.1	-0.0	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.2	-0.1	-0.2	-2.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.1	-0.1	-0.2	-2.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	-0.1	-0.1	-0.1	-2.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.3	-0.1	-0.0	-2.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	+0.5	-0.2	-0.1	-2.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	-0.1	+0.1	-0.2	-2.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6	+0.0	-0.3	-0.2	-2.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	+0.2	+0.1	-0.1	-2.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.1	-0.1	+0.0	-2.6
in planta xylem	Xylemvessel barcodes T0L2P4	-1.1	+0.0	+0.3	-0.0	-1.7
carbon source	Citric Acid 10mM (C)	-0.6	+0.2	-0.6	+0.1	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.1	+0.1	+0.1	-2.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+0.1	+0.2	+0.1	-3.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+0.1	+0.0	-0.1	-2.6
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	+0.9	+0.2	-0.8	+0.1	-2.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	+0.1	+0.0	-0.1	-2.9
in planta xylem	Xylemvessel barcodes T0L1P3	+0.1	-0.1	+0.2	+0.2	-2.3