Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.3728.1	Xcc-8004.3730.1	Xcc-8004.3731.1	Xcc-8004.3732.1	Xcc-8004.3733.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-3.2	N.D.	-4.4	N.D.	-2.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-5.2	N.D.	+0.2	N.D.	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.0	N.D.	-1.5	N.D.	-2.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	N.D.	-3.4	N.D.	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-3.0	N.D.	+0.1	N.D.	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-2.6	N.D.	-1.9	N.D.	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.9	N.D.	-1.7	N.D.	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-3.3	N.D.	-0.3	N.D.	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-3.7	N.D.	+0.3	N.D.	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-5.1	N.D.	+0.6	N.D.	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-2.7	N.D.	-1.2	N.D.	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0	N.D.	-0.9	N.D.	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.9	N.D.	-0.2	N.D.	-0.8
in planta xylem	Xylemvessel barcodes T0L2P4	-3.4	N.D.	+0.9	N.D.	-0.3
control	PBS control	-2.9	N.D.	+0.4	N.D.	-0.3
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-1.5	N.D.	-1.5	N.D.	+0.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-1.0	N.D.	-1.4	N.D.	-0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-2.9	N.D.	+0.1	N.D.	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.8	N.D.	-0.4	N.D.	-0.4
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	-0.3	N.D.	-1.6	N.D.	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.6	N.D.	-0.7	N.D.	-0.2
in planta xylem	Xylemvessel barcodes T0L1P4	+0.5	N.D.	+1.4	N.D.	-4.1
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x	-2.4	N.D.	+0.3	N.D.	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.7	N.D.	+0.2	N.D.	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.4	N.D.	+0.2	N.D.	+0.4
in planta xylem	Xylemvessel barcodes T0L1P3	-2.4	N.D.	+0.3	N.D.	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	N.D.	-1.6	N.D.	+0.3
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-1.5	N.D.	+0.8	N.D.	+0.6
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-0.4	N.D.	+1.8	N.D.	+0.3
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	+0.4	N.D.	+0.6	N.D.	+2.0