Fitness for 5 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

Or view all 98 experiments or choose conditions or try the comparative fitness browser

Group	Condition	Xcc-8004.3540.1	Xcc-8004.3541.1	Xcc-8004.3542.1	Xcc-8004.3543.1	Xcc-8004.3544.1
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	N.D.	-1.3	N.D.	N.D.	N.D.
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	N.D.	-0.9	N.D.	N.D.	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	-0.7	N.D.	N.D.	N.D.
moka	MOKA	N.D.	-0.6	N.D.	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	-0.6	N.D.	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.6	N.D.	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.6	N.D.	N.D.	N.D.
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	N.D.	-0.5	N.D.	N.D.	N.D.
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	N.D.	-0.5	N.D.	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.5	N.D.	N.D.	N.D.
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	N.D.	-0.4	N.D.	N.D.	N.D.
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	N.D.	-0.4	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	+0.4	N.D.	N.D.	N.D.
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	N.D.	+0.4	N.D.	N.D.	N.D.
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	N.D.	+0.4	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	+0.4	N.D.	N.D.	N.D.
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	N.D.	+0.5	N.D.	N.D.	N.D.
supernatant	Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x	N.D.	+0.5	N.D.	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	+0.6	N.D.	N.D.	N.D.
in planta xylem	Xylemvessel barcodes Location 2 4 dpi (25 plantes)	N.D.	+0.6	N.D.	N.D.	N.D.
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	N.D.	+0.6	N.D.	N.D.	N.D.
in planta xylem	Xylemvessel barcodes T0L1P4	N.D.	+0.6	N.D.	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	+0.6	N.D.	N.D.	N.D.
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	N.D.	+0.6	N.D.	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.7	N.D.	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.8	N.D.	N.D.	N.D.
xantho_mme_glucose_dropout_lth	Xantho_MME_glucose_dropout_LTH	N.D.	+0.8	N.D.	N.D.	N.D.
xantho_mme_glucose_casamino	Xantho_MME_glucose_casamino	N.D.	+0.8	N.D.	N.D.	N.D.
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	N.D.	+0.9	N.D.	N.D.	N.D.
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	N.D.	+1.0	N.D.	N.D.	N.D.